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4.5.1 Pectin methyl esterases

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ARABIDOPSIS

RICE

MAIZE

SORGHUM

View interactive version of this tree with hyperlinks to TIGR, MIPS, TAIR and SALK. View the protein sequence file

Click on Gene for links to the Wisconsin T-DNA project for development of homozygous insertional lines.

Click on hypertext links to download IR SPectra and Likely Spectrotypes.

Group A
Gene	Annotation	Accession	Date Received	IR Spectra	PCs, % Classified	Likely Spectrotype	Comments
At1g05310	pectinesterase family protein
At1g69940	pectinesterase family protein	SALK_025876	10/28/04	wild(.xls) mutant(.xls)	4 , 83	Yes
At2g19150	pectinesterase family protein
At2g21610	pectinesterase family protein	SALK_004890	10/28/04	wild(.xls) mutant(.xls)	4 , 72
At2g36700	pectinesterase family protein
At2g36710	pectinesterase family protein	SALK_002121	4/16/04	wild(.xls) mutant(.xls)	5 , 75
At2g47280	pectinesterase family protein
At3g17060	pectinesterase family protein	SALK_050750	10/12/05	wild(.xls) mutant(.xls)	3 , 70
At3g24130	pectinesterase family protein	SALK_063753	3/1/05	wild(.xls) mutant(.xls)	4, 82
At3g29090	pectinesterase family protein	SALK_129027	07/12/04	wild(.xls) mutant(.xls)	4 , 80	Yes
At5g07410	pectinesterase family protein
At5g07420	pectinesterase family protein
At5g07430	pectinesterase family protein
At5g09760	pectinesterase family protein	SALK_011535	10/12/05	wild(.xls) mutant(.xls)	4 , 71
At5g18990	pectinesterase family protein	SALK_057847	10/12/05	wild(.xls) mutant(.xls)	4 , 82	Yes
At5g19730	pectinesterase family protein	SALK_136556	3/1/05	wild(.xls) mutant(.xls)	4, 80
At5g26810	pectinesterase family protein	SALK_002010	12/11/03	wild(.xls) mutant(.xls)	5 , 91	Yes
At5g47500	pectinesterase family protein
At5g55590	pectinesterase family protein	SALK_024104	07/12/04	wild(.xls) mutant(.xls)	4 , 53
At5g61680	pectinesterase family protein	SALK_120535	07/12/04	wild(.xls) mutant(.xls)	4 , 60
At5g64640	pectinesterase family protein	SAIL_752_B01	3/1/05	wild(.xls) mutant(.xls)
Group B
Gene	Annotation*	Accession	Date Received	IR Spectra	PCs, % Classified	Likely Spectrotype	Comments
At2g26450	pectinesterase family protein
At2g47030	PME4
At2g47040	PME5
At3g05610	pectinesterase family protein
At3g06830	pectinesterase family protein	SALK_035240	4/16/04	wild(.xls) mutant(.xls)	4 , 76
At3g62170	pectinesterase family protein
At4g15980	pectinesterase family protein	SALK_036511	3/12/04	wild(.xls) mutant(.xls)	4 , 74
At4g33230	pectinesterase family protein
At5g20860	pectinesterase family protein	SALK_001203	3/12/04	wild(.xls) mutant(.xls)	5 , 78
At5g27870	pectinesterase family protein
At5g49180	pectinesterase family protein	SALK_014108	10/28/04	wild(.xls) mutant(.xls)	5 , 89	Yes
Group C
Gene	Annotation*	Accession	Date Received	IR Spectra	PCs, % Classified	Likely Spectrotype	Comments
At1g11370	pectinesterase family protein
At1g11580	pectin methylesterase, putative	SALK_031903	10/6/03	wild(.xls) mutant(.xls)	5 , 82
At1g11590	pectin methylesterase, putative
At1g44980	pectinesterase family protein	SALK_016371	07/12/04	wild(.xls) mutant(.xls)	4 , 78
At1g53840	PME1
At3g10710	pectinesterase family protein
At3g14300	pectinesterase family protein
At3g27980	pectinesterase family protein	SALK_005679	3/12/04	wild(.xls) mutant(.xls)	4 , 73
At4g03930	pectinesterase family protein
At5g04960	pectinesterase family protein
Group D
Gene	Annotation	Accession	Date Received	IR Spectra	PCs, % Classified	Likely Spectrotype	Comments
At1g02810	pectinesterase family protein
At2g26440	pectinesterase family protein	SALK_058895	07/12/04	wild(.xls) mutant(.xls)	4 , 86	Yes
At2g43050	pectinesterase family protein
At2g47550	pectinesterase family protein
At3g05620	pectinesterase family protein	SALK_026235	07/12/04	wild(.xls) mutant(.xls)	4 , 83	Yes
At3g10720	pectinesterase family protein
At3g43270	pectinesterase family protein	SALK_013629	07/12/04	wild(.xls) mutant(.xls)	4 , 81	Yes
At3g49220	pectinesterase family protein	SALK_062058	4/16/04	wild(.xls) mutant(.xls)	4 , 75
At3g59010	pectinesterase family protein	SALK_012478	12/11/03	wild(.xls) mutant(.xls)	5 , 87	Yes
At4g02300	pectinesterase family protein	SALK_066123	07/12/04	wild(.xls) mutant(.xls)	4 , 85	Yes
At4g02320	pectinesterase family protein	SALK_020237	10/28/04	wild(.xls) mutant(.xls)	4 , 69
At4g02330	pectinesterase family protein
At4g33220	pectinesterase family protein	SALK_050157	10/28/04	wild(.xls) mutant(.xls)	4 , 83	Yes
	pectinesterase family protein	SALK_071362	07/12/04	wild(.xls) mutant(.xls)	4 , 61
At5g04970	pectinesterase family protein
At5g53370	pectinesterase family protein
Group E
Gene	Annotation*	Accession	Date Received	IR Spectra	PCs, % Classified	Likely Spectrotype	Comments
At1g23200	pectinesterase family protein
At1g53830	PME2
At2g45220	pectinesterase family protein	SALK_059908	07/12/04	wild(.xls) mutant(.xls)	4 , 80	Yes
At3g14310	PME3
At3g47400	pectinesterase family protein
At3g60730	pectinesterase family protein	SALK_074653	10/6/03	wild(.xls) mutant(.xls)	4 , 60
At4g00190	pectinesterase family protein
At5g51490	pectinesterase family protein
At5g51500	pectinesterase family protein

* CAZY: http://afmb.cnrs-mrs.fr/CAZY/Index.html

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View interactive version of this tree with hyperlinks to TIGR, MIPS, ORYGENES and GRAMENE. View the protein sequence file

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View interactive version View the protein sequence file

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